I had to move the location of the repository, but the backed up files stayed the same. Do I need to init a new repository at the new location or how does it work?
Yes, init a new repository at the new location with the same repository id and the same storage url:
cd /path/to/new/repository
duplicacy init repository_id storage_url
I actually just manually moved the .duplicacy file to the root of the new repository location and ran backuo. It seemed working after that. Do I still need to run the init command?
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That should be fine. Rerunning the init command would have the same effect.